テーブル

概要

`SegmentTable`	Segment-keyed analysis table.
`SegmentCell`	A single lazy-loadable payload cell.

SegmentTable クラス

class gwexpy.table.segment_table.SegmentTable(meta: DataFrame)[source]

Bases: object

Segment-keyed analysis table.

Each row holds exactly one span (gwpy.segments.Segment) plus arbitrary meta columns and optional heavy payload columns.

Parameters:

meta – pandas.DataFrame with at least a span column whose elements are gwpy.segments.Segment objects.

Raises:

ValueError – If meta does not contain a span column.
TypeError – If any element of the span column is not a gwpy.segments.Segment.

Examples

>>> from gwpy.segments import Segment
>>> import pandas as pd
>>> segs = [Segment(0, 4), Segment(4, 8)]
>>> st = SegmentTable(pd.DataFrame({"span": segs}))
>>> len(st)
2

ファクトリメソッド

`from_segments`	Create a `SegmentTable` from a sequence of segments.
`from_table`	Create a `SegmentTable` from an existing table.

カラム管理

`add_column`	Add a lightweight meta column.
`add_series_column`	Add a payload column (lazy-loadable).

行単位の処理

`apply`	Apply func to each row and collect the results as new columns.
`map`	Apply func to each value in column.
`crop`	Crop each row's payload to its `Segment`.
`asd`	Apply ASD to each row's `TimeSeries` or `TimeSeriesDict`.

選択と変換

`select`	Select rows by boolean mask or column conditions.
`fetch`	Eagerly load all payload cells in columns (default: all).
`materialize`	Materialize lazy payload cells (equivalent to `fetch()` in v0.1).
`to_pandas`	Return a `pandas.DataFrame` representation.
`copy`	Return a copy of this table.

描画 (代表的な API)

`segments`	Draw each row's span as a horizontal bar.
`overlay_spectra`	Overlay frequency spectra with colour-graded lines.
`plot`	General-purpose plot entry.
`scatter`	Scatter plot of two scalar columns.
`hist`	Histogram of a scalar column.
`overlay`	Overlay payload from multiple rows.

classmethod from_segments(segments: Sequence[Any], **meta_columns: Sequence[Any]) → SegmentTable[source]

Create a SegmentTable from a sequence of segments.

Parameters:

segments – Sequence of gwpy.segments.Segment objects.
**meta_columns – Extra meta columns supplied as keyword arguments. Each value must have the same length as segments.

Return type:

SegmentTable

Raises:

ValueError – If any column length does not match len(segments).

Examples

>>> from gwpy.segments import Segment
>>> segs = [Segment(0, 4), Segment(4, 8)]
>>> st = SegmentTable.from_segments(segs, label=["a", "b"])

classmethod from_table(table: Any, span: str = 'span') → SegmentTable[source]

Create a SegmentTable from an existing table.

Parameters:

table – A pandas.DataFrame (or compatible object).
span – Column name to use as the span column. If different from "span", the column is renamed.

Return type:

SegmentTable

Raises:

ValueError – If span column is not found in table.

classmethod read_csv(filepath: str, span_cols: tuple[str, str] = ('start', 'end'), **kwargs: Any) → SegmentTable[source]

Read a SegmentTable from a CSV file.

Parameters:

filepath – Path to the CSV file.
span_cols – The two column names to use as the span start and end values. Ignored if a column named "span" already exists (containing Segment objects or compatible).
**kwargs – Forwarded to pandas.read_csv().

Return type:

SegmentTable

classmethod read(filepath: str, span_cols: tuple[str, str] = ('start', 'end'), **kwargs: Any) → SegmentTable

Read a SegmentTable from a CSV file.

Parameters:

filepath – Path to the CSV file.
span_cols – The two column names to use as the span start and end values. Ignored if a column named "span" already exists (containing Segment objects or compatible).
**kwargs – Forwarded to pandas.read_csv().

Return type:

SegmentTable

add_column(name: str, data: Sequence[Any], kind: str = 'meta') → None[source]

Add a lightweight meta column.

Parameters:

name – Column name. Must not already exist.
data – Sequence of values; length must equal len(self).
kind – Column kind — "meta" or "object".

Raises:

ValueError – If name already exists, length mismatch, or kind is not "meta" or "object".

add_series_column(name: str, data: Sequence[Any] | None = None, loader: Sequence[Callable[[], Any]] | Callable[[int], Callable[[], Any]] | None = None, kind: str = 'timeseries') → None[source]

Add a payload column (lazy-loadable).

Parameters:

name – Column name. Must not already exist.
data – Sequence of concrete payload objects, one per row. Exclusive with loader (but one of the two must be provided).
loader – Either a sequence of zero-argument callables (one per row), or a single callable that accepts the row index and returns a zero-argument callable.
kind – Payload kind. Must be one of: "timeseries", "timeseriesdict", "frequencyseries", "frequencyseriesdict", "object".

Raises:

ValueError – If both data and loader are None, or if length mismatches.
ValueError – If kind is not a valid payload kind.

property columns: list[str]: Ordered list of all column names (meta then payload).

property schema: dict[str, str]: Mapping of column name → kind.

row(i: int) → RowProxy[source]

Return a dict-like proxy for row i.

Parameters:: i – 0-based row index.
Raises:: IndexError – If i is out of range.

apply(func: Callable[[RowProxy], dict[str, Any]], in_cols: list[str] | None = None, out_cols: list[str] | None = None, parallel: bool = False, inplace: bool = False) → SegmentTable[source]

Apply func to each row and collect the results as new columns.

Parameters:

func – Callable that receives a RowProxy and returns a dict[str, object].
in_cols – Hint for which columns are read (ignored in v0.1).
out_cols – Expected keys of func’s return dict. If given, the actual keys must match exactly.
parallel – If True, falls back to sequential execution in v0.1.
inplace – If True, add columns to self; otherwise return a new SegmentTable.

Returns:

Either self (inplace=True) or a new table.

Return type:

SegmentTable

Raises:

TypeError – If func does not return a dict.
ValueError – If out_cols is given and the actual keys do not match.

map(column: str, func: Callable[[Any], Any], out_col: str | None = None, inplace: bool = False) → SegmentTable[source]

Apply func to each value in column.

Parameters:

column – Source column name.
func – Callable that receives the cell value and returns a new value.
out_col – Output column name. Defaults to column + "_mapped".
inplace – Whether to modify self in place.

Return type:

SegmentTable

crop(column: str, out_col: str | None = None, span_col: str = 'span', inplace: bool = False) → SegmentTable[source]

Crop each row’s payload to its Segment.

Parameters:

column – Payload column containing TimeSeries or TimeSeriesDict.
out_col – Output column name; defaults to column + "_cropped".
span_col – Column name for the span (default "span").
inplace – Whether to modify self in place.

Raises:

TypeError – If the payload is not TimeSeries or TimeSeriesDict.

asd(column: str, out_col: str | None = None, **kwargs: Any) → SegmentTable[source]

Apply ASD to each row’s TimeSeries or TimeSeriesDict.

Parameters:

column – Payload column.
out_col – Output column name; defaults to column + "_asd".
**kwargs – Forwarded to asd().

Return type:

SegmentTable

select(mask: Sequence[bool] | None = None, **conditions: Any) → SegmentTable[source]

Select rows by boolean mask or column conditions.

Parameters:

mask – Boolean sequence of length len(self).
**conditions – Simple equality conditions, e.g. label="glitch".

Returns:

A new SegmentTable with only the selected rows.

Return type:

SegmentTable

Raises:

ValueError – If mask length is not equal to len(self).
KeyError – If a condition column does not exist.

fetch(columns: list[str] | None = None) → None[source]

Eagerly load all payload cells in columns (default: all).

Parameters:: columns – List of payload column names to load. None loads all.

materialize(columns: list[str] | None = None, inplace: bool = True) → SegmentTable | None[source]

Materialize lazy payload cells (equivalent to fetch() in v0.1).

Parameters:

columns – Payload columns to materialize. None means all.
inplace – If True (default), mutate self. If False, return a copy with the payload loaded.

Returns:

None if inplace=True; new table if inplace=False.

Return type:

SegmentTable or None

to_pandas(meta_only: bool = True) → DataFrame[source]

Return a pandas.DataFrame representation.

Parameters:: meta_only – If True (default), return only the meta columns. If False, payload columns are appended as object columns containing the resolved cell values.
Return type:: pandas.DataFrame

copy(deep: bool = False) → SegmentTable[source]

Return a copy of this table.

Parameters:: deep – If False (default), meta is copied and payload cells are referenced (shallow). If True, payload values are also deep-copied where possible.
Return type:: SegmentTable

clear_cache() → None[source]: Discard all cached payload values, forcing re-load on next access.

plot(column: str | None = None, *, row: int | None = None, mode: str | None = None, **kwargs: Any) → Any[source]: General-purpose plot entry. Requires both column and row.

scatter(x: str, y: str, color: str | None = None, *, selection: Any | None = None, **kwargs: Any) → Any[source]: Scatter plot of two scalar columns.

hist(column: str, *, bins: int = 10, **kwargs: Any) → Any[source]: Histogram of a scalar column.

segments(*, y: str | None = None, color: str | None = None, **kwargs: Any) → Any[source]

Draw each row’s span as a horizontal bar.

This is one of the two representative APIs of SegmentTable (alongside overlay_spectra()).

overlay(column: str, rows: list[int], *, separate: bool = False, sharex: bool = True, **kwargs: Any) → Any[source]: Overlay payload from multiple rows.

overlay_spectra(column: str, *, channel: str | None = None, rows: list[int] | None = None, color_by: str | None = None, sort_by: str | None = None, cmap: str = 'viridis', alpha: float = 0.7, linewidth: float = 0.8, colorbar: bool = True, colorbar_label: str | None = None, xscale: str = 'log', yscale: str = 'log', xlim: Any | None = None, ylim: Any | None = None, ax: Any | None = None) → Any[source]

Overlay frequency spectra with colour-graded lines.

Representative API of SegmentTable for frequency-domain visualisation (alongside segments() for time-domain).

display(max_rows: int = 20, max_cols: int = 8, meta_only: bool = False) → DataFrame[source]

Return a summary pandas.DataFrame for interactive display.

Parameters:

max_rows – Maximum rows to include.
max_cols – Maximum columns to include.
meta_only – If True, omit payload columns.

Return type:

pandas.DataFrame

SegmentCell クラス

class gwexpy.table.segment_cell.SegmentCell(value: Any | None = None, loader: Callable[[], Any] | None = None, cacheable: bool = True)[source]

Bases: object

A single lazy-loadable payload cell.

Parameters:

value (Any | None) – The concrete payload object. May be None when a loader is set.
loader (collections.abc.Callable[[], Any] | None) – A zero-argument callable that returns the payload. Ignored when value is already set.
cacheable (bool) – When True (default) the result of loader is stored in value after the first call, so subsequent calls return directly.

Examples

>>> cell = SegmentCell(loader=lambda: 42, cacheable=True)
>>> cell.get()
42
>>> cell.is_loaded()
True

value: Any | None = None

loader: Callable[[], Any] | None = None

cacheable: bool = True

get() → Any[source]

Return the payload, loading it if necessary.

Returns:: The resolved payload.
Return type:: object
Raises:: ValueError – If both value and loader are None.

is_loaded() → bool[source]: Return True if the value has been loaded (or was set directly).

clear() → None[source]: Discard the cached value so the next get() call re-invokes the loader.

モジュール

SegmentTable — segment-keyed analysis container.

Each row represents one analysis unit defined by a Segment (a half-open time interval [start, end)). Columns may be lightweight meta values or heavy payload objects such as TimeSeries. Payload columns are stored as SegmentCell instances that support lazy loading and optional caching.